Long-read sequence and assembly of segmental duplications

less than 1 minute read

It's out! Check out my first first author paper "Long-read sequence and assembly of segmental duplications" out today at @naturemethods (https://t.co/Xh3YfngI02)! Many thanks to everyone who made it happen: Philip Dishuck, Tonia Brown, @EichlerEE, @mjpchaisson, and more!
— Mitchell R. Vollger (@mrvollger) December 17, 2018

Share on

Twitter Facebook LinkedIn

Using rustybam on PAFs for SafFire

less than 1 minute read

rb trim-paf .test/asm_small.paf `#trims back alignments that align the same query sequence more than once` \ | rb break-paf --max-size 100 `#breaks the a...

StainedGlass: Interactive visualization of massive tandem repeat structures with identity heatmaps

less than 1 minute read

StainedGlass: Interactive visualization of massive tandem repeat structures with identity heatmaps https://t.co/4BAUkqegGK #bioRxiv— bioRxiv (@biorxivp...

Segmental duplications in a complete human genome

less than 1 minute read

Excited to finally share: Segmental duplications and their variation in a complete human genome! This is a product of an awesome collaboration in the T2T con...

Improved assembly and variant detection of a haploid human genome using single-molecule, high-fidelity long reads

less than 1 minute read

The Eichler lab at @uwgenome has compared high-fidelity (#HiFi) and continuous long-read (#CLR) datasets, and concluded that HiFi may be the most effective s...

Mitchell R. Vollger

Share on

You May Also Enjoy

Using rustybam on PAFs for SafFire

StainedGlass: Interactive visualization of massive tandem repeat structures with identity heatmaps

Segmental duplications in a complete human genome

Improved assembly and variant detection of a haploid human genome using single-molecule, high-fidelity long reads