Segmental duplications in a complete human genome

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Excited to finally share: Segmental duplications and their variation in a complete human genome! This is a product of an awesome collaboration in the T2T consortium and I am thrilled to be sharing the SD side of this story. https://t.co/1jAqkheNba
— Mitchell R. Vollger (@mrvollger) May 27, 2021

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Using rustybam on PAFs for SafFire

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rb trim-paf .test/asm_small.paf `#trims back alignments that align the same query sequence more than once` \ | rb break-paf --max-size 100 `#breaks the a...

StainedGlass: Interactive visualization of massive tandem repeat structures with identity heatmaps

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StainedGlass: Interactive visualization of massive tandem repeat structures with identity heatmaps https://t.co/4BAUkqegGK #bioRxiv— bioRxiv (@biorxivp...

Improved assembly and variant detection of a haploid human genome using single-molecule, high-fidelity long reads

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The Eichler lab at @uwgenome has compared high-fidelity (#HiFi) and continuous long-read (#CLR) datasets, and concluded that HiFi may be the most effective s...

Long-read sequence and assembly of segmental duplications

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It's out! Check out my first first author paper "Long-read sequence and assembly of segmental duplications" out today at @naturemethods (https:...

Mitchell R. Vollger

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